Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid
Reexamination Certificate
2006-06-06
2006-06-06
Fredman, Jeffrey (Department: 1637)
Chemistry: molecular biology and microbiology
Measuring or testing process involving enzymes or...
Involving nucleic acid
C435S091100, C435S091200, C536S023100, C536S024300
Reexamination Certificate
active
07056666
ABSTRACT:
Means for simultaneous parallel sequence analysis of a large number of biological polymer macromolecules. Apparatus and methods may use fluorescent labels in repetitive chemistry to determine terminal manomers on solid phase immobilized polymers. Reagents which specifically recognize terminal manomers are used to label polymers at defined positions on a solid substrate.
REFERENCES:
patent: 3849137 (1974-11-01), Barznski et al.
patent: 3862056 (1975-01-01), Hartman
patent: 4072576 (1978-02-01), Arwin et al.
patent: 4238757 (1980-12-01), Schenk
patent: 4314821 (1982-02-01), Rice
patent: 4339528 (1982-07-01), Goldman
patent: 4405771 (1983-09-01), Jagur
patent: 4444878 (1984-04-01), Paulus
patent: 4444892 (1984-04-01), Malmros
patent: 4517338 (1985-05-01), Urdea et al.
patent: 4542102 (1985-09-01), Dattagupta et al.
patent: 4555490 (1985-11-01), Merril
patent: 4562157 (1985-12-01), Lowe et al.
patent: 4569967 (1986-02-01), Kornreich et al.
patent: 4582789 (1986-04-01), Sheldon et al.
patent: 4631211 (1986-12-01), Houghton
patent: 4637861 (1987-01-01), Krull et al.
patent: 4656127 (1987-04-01), Mundy
patent: 4681859 (1987-07-01), Kramer
patent: 4689405 (1987-08-01), Frank et al.
patent: 4704353 (1987-11-01), Humphries et al.
patent: 4713326 (1987-12-01), Dattagupta et al.
patent: 4713347 (1987-12-01), Mitchell et al.
patent: 4719615 (1988-01-01), Feyrer et al.
patent: 4722906 (1988-02-01), Guire
patent: 4762881 (1988-08-01), Kauer
patent: 4777019 (1988-10-01), Dandekar
patent: 4786684 (1988-11-01), Glass
patent: 4794150 (1988-12-01), Steel
patent: 4808508 (1989-02-01), Platzer
patent: 4811218 (1989-03-01), Hunkapiller et al.
patent: 4822566 (1989-04-01), Newman
patent: 4833092 (1989-05-01), Geysen
patent: 4851331 (1989-07-01), Vary et al.
patent: 4855225 (1989-08-01), Fung et al.
patent: 4865990 (1989-09-01), Stead et al.
patent: 4889818 (1989-12-01), Gelfand et al.
patent: 4946942 (1990-08-01), Fuller et al.
patent: 4962037 (1990-10-01), Jett et al.
patent: 4965188 (1990-10-01), Mullis et al.
patent: 4973493 (1990-11-01), Guire
patent: 4979959 (1990-12-01), Guire
patent: 5002867 (1991-03-01), Macevicz
patent: 5026840 (1991-06-01), Dattagupta et al.
patent: 5075216 (1991-12-01), Innis et al.
patent: 5126239 (1992-06-01), Livak et al.
patent: 5143854 (1992-09-01), Pirrung et al.
patent: 5202231 (1993-04-01), Drmanac
patent: 5492806 (1996-02-01), Drmanac et al.
patent: 5503980 (1996-04-01), Cantor
patent: 5525464 (1996-06-01), Drmanac et al.
patent: 5527681 (1996-06-01), Holmes
patent: 5547839 (1996-08-01), Dower et al.
patent: 5631134 (1997-05-01), Cantor
patent: 5667972 (1997-09-01), Drmanac et al.
patent: 5695940 (1997-12-01), Drmanac et al.
patent: 5753439 (1998-05-01), Smith et al.
patent: 5795714 (1998-08-01), Cantor et al.
patent: 5807522 (1998-09-01), Brown et al.
patent: 5849878 (1998-12-01), Cantor et al.
patent: 5902723 (1999-05-01), Dower et al.
patent: 5972619 (1999-10-01), Drmanac
patent: 6007987 (1999-12-01), Cantor et al.
patent: 6013431 (2000-01-01), Soderlund et al.
patent: 6018041 (2000-01-01), Drmanac
patent: 6025136 (2000-02-01), Drmanac
patent: 6054270 (2000-04-01), Southern
patent: 2242394 (1974-03-01), None
patent: 3440141 (1986-05-01), None
patent: 088 636 (1983-09-01), None
patent: 127 438 (1984-12-01), None
patent: 245 662 (1987-11-01), None
patent: 288 310 (1988-10-01), None
patent: 319 012 (1989-06-01), None
patent: 328 256 (1989-08-01), None
patent: 373 203 (1989-11-01), None
patent: 392 546 (1990-10-01), None
patent: 416 817 (1991-03-01), None
patent: 607 151 (2002-11-01), None
patent: 2233654 (1991-01-01), None
patent: 60-248699 (1985-12-01), None
patent: 63-084499 (1988-04-01), None
patent: WO 84/03564 (1984-09-01), None
patent: WO 86/00991 (1986-02-01), None
patent: WO 86/06487 (1986-11-01), None
patent: WO 89/10414 (1989-11-01), None
patent: WO 89/10977 (1989-11-01), None
patent: WO 89/11548 (1989-11-01), None
patent: WO 89/12819 (1989-12-01), None
patent: WO 90/00887 (1990-02-01), None
patent: WO 90/03382 (1990-04-01), None
patent: WO 90/04652 (1990-05-01), None
patent: WO 90/09455 (1990-08-01), None
patent: WO 90/11372 (1990-10-01), None
patent: WO 90/13666 (1990-11-01), None
patent: WO 90/15070 (1990-12-01), None
patent: WO 91/04266 (1991-04-01), None
patent: WO 91/06678 (1991-05-01), None
patent: WO 91/07087 (1991-05-01), None
patent: WO 91/13075 (1991-09-01), None
patent: WO 93/17126 (1993-09-01), None
patent: WO 95/09248 (1995-04-01), None
patent: WO 98/31836 (1998-07-01), None
“Affymax raises $25 million to develop high-speed drug discovery system,”Biotechnology News, 10(3):7-8 (1990).
Ajayaghosh et al., “Solid-Phase Synthesis ofN-Methyl- andN-Ethylamides of Peptides Using Photolytically Detachable ((3-Nitro-4((alkylamino)methyl)benzamido)methyl)polystyrene Resin,”J.Org.Chem., 55(9):2826-2829 (1990).
Ajayaghosh et al., “Solid-phase synthesis of C-terminal peptide amides using a photoremovable α-methylphenacylamido anchoring linkage,”Proc. Ind. Natl. Sci(Chem.Sci.), 100(5):389-396 (1988).
Ajayaghosh et al., “Polymer-supported Solid-phase Synthesis of C-Terminal Peptide N-Methylamides Using a Modified Photoremovable 3-Nitro-4-N-methylaminomethylpolystyrene Support,”Ind.J.Chem., 27B:1004-1008 (1988).
Ajayaghosh et al., “Polymer-Supported Synthesis of Protected Peptide Segments on a Photosensitive o-Nitro( α-Methyl)Bromobenzyl Resin,”Tetrahedron, 44(21);6661-6666 (1988).
Amit et al., “Photosensitive Protecting Groups of Amino Sugars and Their Use in Glycoside Synthesis. 2-Nitrobenzyloxycarbonylamino and 6-Nitroveratryloxycarbonylamino Derivatives,”J.Org.Chem, 39(2):192-196 (1974).
Applied Biosystems, Model 431A Peptide Synthesizer User's manual, Sections 2 and 6, (Aug. 15, 1989).
Atherton et al., Solid Phase Peptide Synthesis: A Practical Approach, IRL Press, (1989), tbl. of cont., pp. vii-ix.
Bains et al., “A Novel Method for Nucleic Acid Sequence Determination,”J.Theor.Biol., 135:303-307 (1988).
Bains, W., “Alternative Routes Through the Genome,”Biotechnology, 8:1251-1256 (1988).
Balachander et al., “Functionalized Siloxy-Anchored Monolayers with Exposed Amino, Azido, Bromo, or Cyano Groups,”Tetrahed. Ltrs., 29(44):5593-5594 (1988).
Barinaga, M., “Will ‘DNA Chip’ Speed Genome Initiative,”Science, 253:1489 (1985).
Baum, R., “Fledgling firm targets drug discovery process,”Chem. Eng. News, p. 10-11 (1990).
Biorad Chromatography Electrophoresis Immunochemistry Molecular Biology HPLC catalog M 1987 pp. 182.
Carrano et al., “A High-Resolution, Fluorescence-Based, Semiautomated Method for DNA Fingerprinting,”Genomics, 4:129-136 (1989).
Chatterjee et al., “Inducible Alkylation of DNA Using an Oligonucleotide-Quinone Conjugate,”Am. J. Chem. Soc., 112:6397-6399 (1990).
Chetverin et al., “Oligonucleotide Arrays: New Concepts and Possibilities,”Biotechnology, 12:1093-1099 (1994).
Chidgeavadze et al., “2', 3'-Dieoxy-3' aminonucleoside 5'-triphosphates are the terminators of DNA synthesis catalyzed by DNA polymerases,”Nuc. Acids Res., 12(3):1671-1686 (1984).
Chidgeavadze et al., “3'-Fluoro-2', 3'-dideoxyribonucleoside 5'- triphosphates: Terminators of DNA synthesis,”FEBS Letters, 183(2):275-278 (1985).
Chien et al., “Deoxyribonucleic Acid Polymerase from the Extreme Thermophile Thermus aquaticus,”J. Bacteriol., 127:1550-1557 (1976).
Cimino et al., “Psoralens as Photoactive Probes of Nucleic Acid Structure and Function: Organic Chemistry, Photochemistry and Biochemistry,”Ann. Rev. Biochem., 54:1151-1193 (1985).
Corbett et al., “Reaction of Nitroso Aromatics with Glyoxylic Acid. A New Path to Hydroxamic Acids,”J. Org. Chem., 45:2834-2839 (1980).
Coulson et al., “Toward a physical map of the genome of the nematodeCaenorhabditis elegans,” PNAS, 83:7821-7825 (1986).
Craig et al., “Ordering of cosmid clones covering the Herpes simplex virus type I (HSV-1)
Dower William J.
Fodor Stephen P. A.
Affymetrix Inc.
Fredman Jeffrey
Townsend and Townsend / and Crew LLP
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