Amino acid sequence pattern matching

Details Amino acid sequence pattern matching Amino acid sequence pattern matching

2005-05-10

2005-05-10

Lee, John R. (Department: 2881)

Radiant energy

Ionic separation or analysis

Methods

C250S281000, C436S089000, C436S094000, C435S005000, C435S006120

Reexamination Certificate

active

06891154

ABSTRACT:
A method for locating pattern matches in amino acids by use of various and sequential filters capable of determining inner sample pattern matches, inner group pattern matches, and word matching for purposes of further analysis or data mining. Filters include the use of a scoring scheme, comparison of scan numbers versus sequence of common ions to be MS/MS, and daughter ion subtraction for obtaining pattern match candidates.

REFERENCES:
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patent: 5538897 (1996-07-01), Yates et al.
patent: 6017693 (2000-01-01), Yates et al.
patent: 6582965 (2003-06-01), Townsend et al.
patent: 6677114 (2004-01-01), Schneider et al.

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