Methods of identifying therapeutic compounds in a...

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

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C435S007100

Reexamination Certificate

active

10357556

ABSTRACT:
The invention provides a method of identifying therapeutic compounds in a genetically defined setting. The method consists of contacting a cell indicative of a pathological condition from a diseased individual and a cell from a genetically related normal individual with a plurality of candidate therapeutic compounds under suitable assay conditions, and identifying a compound that preferentially alters a predetermined property of the cell from the diseased individual.

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Giuliano and Taylor, “Fluorescent-protein biosensors: new tools for drug discovery”TIBTECH16:135-140 (1998).
Gonzalez and Negulescu, “Intracellular detection assays for high-throughput screening”Curr. Opin. in Biotech9:624-631 (1998).
Gulcher and Stefansson, “Population genomics: laying the groundwork for genetic disease modeling and targeting,”Clin. Chem. Lab. Med.36(8) :523-527 (1998).
Hertzberg, R.P., “Whole cell assays in screening for biologically active substances”Current Opinion in Biotechnology4:80-84 (1993).
Jayawickreme and Kost, “Gene expression systems in the development of high-throughput screens”Curr. Opin. Biotech.8:629-634 (1997).
Major, J., “Challenges of High Throughput Screening Against Cell Surface Receptors”J. Receptor&Signal Transduction Res.15(1-4) :595-607 (1995).
Marshal, E., “Whose DNA Is It, Anyway?”Science278:564-567 (1997).
Perlin et al., “The Plasma Membrane H+-ATPase of Fungi”Annals New York Academy of Sciences834:609-617 (1997).
Persidis, A., “High throughput screening”Nature Biotechnology16:488-489 (1998).
Rice et al., “Development of a High Volume Screen to Identify Inhibitors of Endothelial Cell Activation”Analytical Biochemistry241:254-259 (1996).
Rodrigues, A.D., “Preclinical Drug Metabolism in the Age of High-Throughput Screening: An Industrial Perspective”Pharmaceutical Research14(11) :1504-1510 (1997).
Sheffield et al., “Use of isolated inbred human populations for identification of disease genes”Trends in Genetics14(10) :391-396 (1998).
Smith, D.R., “Microbial pathogen genomes—new strategies for identifying therapeutics and vaccine targets”TIBTECH14:290-293 (1996).
Sterrer and Henco, “Fluorescence Correlation Spectroscopy (FCS)—A Highly Sensitive Method to Analyze Drug-Target Interactions”J. Receptor and Signal Transduction Res.17(1-3) :511-520 (1997).
Sumida et al., “Selective reduction of T cells bearing invariant Vα24JαQ antigen receptor in patients with systemic sclerosis,”J. Exp. Med.182:1163-1168 (1995).
Taylor et al., “Linkage Analysis of Genetic Disorders”Methods Mol. Biol.68:11-25 (1997).
Vuorio et al, “Familial hypercholesterolemia in the Finnish north Karelia. A molecular, clinical, and genealogical study”Arterioscler. Thromb. Vasc. Biol.17:3127-3138 (1997).
Weeks and Lathrop, “Polygenic disease: methods for mapping complex disease traits”Trends in Genetics11(12) :513-519 (1995).
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(Visited Dec. 16, 1998) <http://www.aurorabio.com/tech—platform-assay—technologies. html>.
(Visited Dec. 16, 1998) <http://www.aurorabio.com/tech—platform-uhtss—deveopment. html>.
(Visited Dec. 16, 1998) <http://www.mdyn.com/arrays/ArrayImages.html>.
Bogardus et al., “Pima Indians as a model to study the genetics of NIDDM” J. Cell Biochem. 48:337-343 (1992).
Desnottes, J.F., “New targets and strategies for the development of antibacterial agents” TIBTECH 14:134-140 (1996).
Francis, G.E., “Theoretical and practical considerations in screening strategies for differentiation agents” Differentiation 57:63-75 (1994).
Giuliano and Taylor, “Fluorescent-protein biosensors: new tools for drug discovery” TIBTECH 16:135-140 (1998).
Gonzalez and Negulescu, “Intracellular detection assays for high-throughput screening” Curr. Opin. in Biotech 9:624-631 (1998).
Gulcher and Stefansson, “Population Genomics: Laying the Groundwork for Genetic Disease Modeling and Targeting”; Clin Chem Lab Med 1998; 36(i):523-527; 1998 Walter de Gruyter.
Hertzberg, R.P., “Whole cell assays in screening for biologically active substances” Current Opinion in Biotechnology 4:80-84 (1993).
Jayawickreme and Kost, “Gene expression systems in the development of high-throughput screens” Curr. Opin. Biotech. 8:629-634 (1997).
Major, J., “Challenges of High Throughput Screening Against Cell Surface Receptors” J. Receptor & Signal Transduction Res. 15(1-4):595-607 (1995).
Marshal, E., “Whose DNA Is It, Anyway?” Science 278:564-567 (1997).
Perlin et al., “The Plasma Membrane H.sup.+ -ATPase of Fungi” Annals New York Academy of Sciences 834:609-617 (1997).
Persidis, A., “High throughput screening” Nature Biotechnology 16:488-489 (1998).
Rice et al., “Development of a High Volume Screen to Identify Inhibitors of Endothelial Cell Activation” Analytical Biochemistry 241:254-259 (1996).
Rodrigues, A.D., “Preclinical Drug Metabolism in the Age of High-Throughput Screening: An Industrial Perspective” Pharmaceutical Research 14(11):1504-1510 (1997).
Sheffield et al., “Use of isolated inbred human populations for identification of disease genes” Trends in Genetics 14(10):391-396 (1998).
Smith, D.R., “Microbial pathogen genomes—new strategies for identifying therapeutics and vaccine targets” TIBTECH 14:290-293 (1996).
Sterrer and Henco, “Fluorescence Correlation Spectroscopy (FCS)—A Highly Sensitive Method to Analyze Drug-Target Interactions” J. Receptor and Signal Transduction Res. 17(1-3):511-520 (1997).
Sumida et al., “Selective reduction of T cells bearing invariant V.alpha.24J.alpha.Q antigen receptor in patients with systemic sclerosis,” J. Exp. Med. 182:1163-1168 (1995).
Taylor et al., “Linkage Analysis of Genetic Disorders” Methods Mol. Biol. 68:11-25 (1997).
Vuorio et al, “Familial hypercholesterolemia in the Finnish north Karelia. A molecular, clinical, and genealogical study” Arterioscler. Thromb. Vasc. Biol. 17:3127-3138 (1997).
Weeks and Lathrop, “Polygenic disease: methods for mapping complex disease traits” Trends i

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