Electron induced fluorescent method for nucleic acid sequencing

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S091200, C536S023100

Reexamination Certificate

active

10374636

ABSTRACT:
An apparatus, compositions and related methods for sequencing a target nucleic acid are described. In certain embodiments, the apparatus is a microfluidic apparatus comprising an input chamber, microchannel, output chamber and a detection unit that is operatively connected to the microchannel. In preferred embodiments, the methods include hybridizing a target nucleic acid to one or more probe libraries, moving the hybridized target nucleic acid past the detector, and detecting bound probes. Probe libraries may comprise oligonucleotides or oligonucleotide analogs, preferably with each probe uniquely labeled. A linear order of labeled probes hybridized to the target nucleic acid can be detected and the target nucleic acid sequence deduced. In preferred embodiments, probe labels are detected by analysis of electron-induced fluorescence of probes labeled with conductive polymers.

REFERENCES:
patent: 5079169 (1992-01-01), Chu et al.
patent: 5202231 (1993-04-01), Drmanac et al.
patent: 5332666 (1994-07-01), Prober et al.
patent: 5436130 (1995-07-01), Mathies et al.
patent: 5545531 (1996-08-01), Rava et al.
patent: 5650489 (1997-07-01), Lam et al.
patent: 5656739 (1997-08-01), Cubicciotti
patent: 5674743 (1997-10-01), Ulmer
patent: 5700637 (1997-12-01), Southern
patent: 5708153 (1998-01-01), Dower et al.
patent: 5776674 (1998-07-01), Ulmer et al.
patent: 5804384 (1998-09-01), Muller et al.
patent: 5821060 (1998-10-01), Arlinghaus et al.
patent: 5846727 (1998-12-01), Soper et al.
patent: 5863727 (1999-01-01), Lee et al.
patent: 5972619 (1999-10-01), Drmanac et al.
patent: 6018041 (2000-01-01), Drmanac et al.
patent: 6025136 (2000-02-01), Drmanac
patent: 6045996 (2000-04-01), Cronin et al.
patent: 6063573 (2000-05-01), Kayyem
patent: 6083695 (2000-07-01), Hardin et al.
patent: 6117643 (2000-09-01), Simpson et al.
patent: 6136543 (2000-10-01), Anazawa et al.
patent: 6188167 (2001-02-01), Endo et al.
patent: 6225068 (2001-05-01), Wolfrum
patent: 6232062 (2001-05-01), Kayyen
patent: 6238871 (2001-05-01), Köster
patent: 6297006 (2001-10-01), Drmanac et al.
patent: 6329209 (2001-12-01), Wagner et al.
patent: 6447724 (2002-09-01), Jensen et al.
patent: 2002/0081588 (2002-06-01), De Lumley-woodyear et al.
patent: WO 99/57321 (1999-11-01), None
patent: WO 00/36152 (2000-06-01), None
patent: WO 01/18246 (2001-03-01), None
patent: WO 01/34302 (2001-05-01), None
Burns, Mark A. et al., “Microfabricated structures for integrated DNA analysis”,Proc. Natl. Acad. Sci.,93:5556-5561, May 1996.
Knight, James B. et al., “Hydrodynamic Focusing on a Silicon Chip: Mixing Nanoliters in Microseconds”,Physical Review Letters,80(17):3863-3866, Apr. 1998.
Machara, Nicholas P. et al., “Efficient detection of single molecules eluting off an optically trapped microsphere”,Bioimaging,6:33-42, 1998.
Chou, Hou-Pu et al., “A Microfabricated device for sizing and sorting DNA molecules”,Proc. Natl. Acad. Sci.,96:11-13, 1999.
Chen, Liaohai et al., “Highly sensitive biological and chemical sensors based on reversible fluorescence quenching in a conjugated polymer”,PNAS,96(22):12287-12292, Oct. 1999.
Meller, Amit et al., “Rapid nanopore discrimination between single polynucleotide molecules”,PNAS,97(3):1079-1084, Feb. 2000.
Rusu, Cristina et al., “Fabrication of micromachined pipettes in a flow channel for single molecule handling of DNA”,Proceedings MEMS,Japan, 2000.
Schafer, Burk et al., “Single molecule DNA restriction analysis in the light microscope”,Single Molecules,1:33-40, 2000.
Chen, Liaohai et al., “Tuning the properties of conjugated polyelectrolytes through surfactant complexation”,Journal American Chemical Society,Apr. 2000.
Baumann, Christoph G. et al., “Stretching of single collapsed DNA molecules”,Biophysical Journal,78:1965-1978, Apr. 2000.
Hegner, Martin, “DNA handles for single molecule experiments”,Single Molecules,1(2):139-144, 2000.
Huser, Thomas et al., “Single chain spectroscopy of conformational dependence of conjugated polymer photophysics”,PNAS,97(21)11187-11191, Oct. 2000.
Tretiak, S. et al., “CEO/semiempirical calculations of UV-visible spectra in conjugated molecules”,Chemical Physics Letters,331:561-568, Dec. 2000.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Electron induced fluorescent method for nucleic acid sequencing does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Electron induced fluorescent method for nucleic acid sequencing, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Electron induced fluorescent method for nucleic acid sequencing will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3825898

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.