N 8 -and c 8 -linked purine based and structurally related...

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

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C536S023100, C536S024300

Reexamination Certificate

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07063945

ABSTRACT:
The present invention is directed to a nucleic acid binding compound comprising N8- or C8-linked purine bases or structurally related heterocycles, a compound useful for the preparation of such compound, a binding product of this nucleic acid binding compound with a nucleic acid, a method for the determination of a nucleic acid using said compound, and several uses of 8-linked purine bases and structurally related heterocycles. Compounds according to the present invention have advantageous properties when used in hybridization methods.

REFERENCES:
patent: 5438131 (1995-08-01), Bergstrom et al.
patent: 0 680 969 (1998-11-01), None
Budanova, O.V., et al., 1976, “Ribosylation of 7-Methylthiopyrazolo-[4,3-d] Pyrimidine,”Zhurnal Organicheskoi Khimii, 12(5):1131.
Goryunova, O.V., et al., 1978, “Glycosides of Pyrazole and Condensed Pyrazole Heterocyclic Systems. XXI* Nucleosides of 7-Substituted Pyrazolo [4,3-d] Pyrimidines,”Zhurnal Organicheskoi Khimil, 14(3):651-660.
Bobek, et al., 1968 “Nucleic acid components and their analogues. CXVIII.* Synthesis of 8-8-d-Ribofuranosyladcnine stating for 2,5-Anhydro-d-Allonic Acid.”Collection Czechoslov, Chem Commun, 34247:252.
Hecht, et al., 1976 “Synthesis and Biological Activity of Pyrazolo[3,4-d]pyrimidine Nucleosides and Nucleotides Related to Tubercidin, Toyocamycin, and Sangivamycin”Biochemistry, 15(5):1005-1015.
Koh, et al., 1992 Design of a Nonnatural Deoxyribonucleoside for Recognition of GC Base Pairs by Oligonucleotide-.
Seela, et al., 2000 “Base-Pairing Properties of 8-Aza-7-deazaadenine Linked via the 8-Position to the DNA Backbone.”Helvetica Chimica Acta, 83:1437-1453.
Seela, et al., 1999 “Oligonucleotides containing the Pyrazolo[3,4-d]Pyrimidine analogue of 2-aminopurine; Duplexes with parallet and antiparallel chain orientation.”Collection Symposium Series,2:320-323.
Seela, et al., 1998 “Syntheis of 7-alkynylated 8-zaz-7-deaza-2'—deoxyadenosines via the via the Pd-catapysed cross-coupling reaction.”J. Chem. Soc Perkin Trans 1, 3233-3239.
Seela, et al., 1994 “94. Synthesis, Base Pairing, and Structural Transitions of Oligodeoxyribonubleotides Containing 8-Aza 2' -deoxyguanosine.”Helvetica Chimica Acta,77:1003-1017.
Seela, et al., 1989 “96. 2'—Deoxy-B-D-ribofuranosides of N6 -Methylated 7-Deazaadenine and 8-Aza -7-deazaadenine: Solid-Phase Synthesis of Oligodeoxyribonucleotides and Properties of Self-Complementary Duples.”Helvetica Chimica Acta, 72(14):868-881.
Seela, et al., 1988 “193. 8-Aza-7-deazaadenine N8—N9 -(p-d-2'-Deoxyribofuranosides): Building Blocks for Automated DNA synthesis and Properties of Oligodeoxyribonucleotides.”Helvetica Chimica Acta,71:1813-1823.

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