Optimization of cells for endogenous gene activation

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S320100, C435S455000, C536S023100, C536S024100

Reexamination Certificate

active

07008764

ABSTRACT:
The invention concerns a process for optimizing the gene expression in cells. A first aspect concerns a process for changing the expression of a nucleic acid sequence which is present endogenously in a eukaryotic cell by introduction of a heterologous expression control sequence into the genome of the cell by means of homologous recombination as well as site-specific recombinase-mediated excision of inserted foreign DNA and its replacement by further heterologous expression control sequences or/and amplification genes. In addition the invention concerns the introduction of one or several nucleic acid sequences to which an activator protein or an activator protein complex binds e.g. a hypoxia-inducible factor (HIF), into the genome of a eukaryotic cell by homologous recombination in order to change the expression of a target gene. Furthermore the invention concerns a process for testing the influence of 5′ or 3′ non-coding nucleic acid fragments on the expression of a target gene by determining the expression of a reporter gene. In addition the invention concerns a process for providing a DHFR-negative eukaryotic cell containing a recombinase target sequence as well as the expression of a nucleic acid sequence inserted into the recombinase target sequence.

REFERENCES:
patent: 4959317 (1990-09-01), Sauer
patent: 5434066 (1995-07-01), Bebee et al.
patent: 5695977 (1997-12-01), Jurka
patent: 6020144 (2000-02-01), Gueiros-Filho et al.
patent: 6130364 (2000-10-01), Jakobovits et al.
patent: 0 220 009 (1987-04-01), None
patent: 0 343 783 (1989-11-01), None
patent: 0 747 485 (1996-12-01), None
patent: 0 747 485 (1996-12-01), None
patent: 0747485 (1996-12-01), None
patent: 90/11354 (1990-10-01), None
patent: WO 90/11354 (1990-10-01), None
patent: 91/09955 (1991-07-01), None
patent: WO 91/09955 (1991-07-01), None
patent: WO 91/09955 (1991-07-01), None
patent: 92/15694 (1992-09-01), None
patent: WO94/12650 (1994-06-01), None
patent: 94/17176 (1994-08-01), None
patent: WO 94/17176 (1994-08-01), None
patent: 96/29411 (1996-09-01), None
patent: WO 96/29411 (1996-09-01), None
patent: WO 96/29411 (1996-09-01), None
patent: 96/30498 (1996-10-01), None
patent: WO 96/30498 (1996-10-01), None
patent: WO 96/39426 (1996-12-01), None
patent: WO97/37012 (1997-10-01), None
Cruz et al. Double targeted gene replacement for creatioging null mutants. PNAS vol. 88:7170-7174, Aug. 1991.
Cruz et al. Gen replacement in parasitic protozoa. Nature vol. 348:171-173, Nov. 8, 1990, sent in previous action.
Mazure et al. Oncogenic transformation and hypoxia synergistically act to modulate vascular endothial growth factor expression. Cancer Research. vol. 56:3436-3440, Aug. 1996.
Gu et al., “Independent Control of Immunoglobulin Switch Recombination at Individual Switch Regions Evidenced through Cre-IoxP-Mediated Gene Targeting”, CELL, vol. 73, 1155-1164, Jun. 19, 1992.
Database WPI, Section CH, Week 198801 Derwent Publications Ltd., & JP 62 265922 A, Nov. 18, 1987.
Fukushige et al., Genomic Targeting with a Positive-Selection LOX Integration Vector Allows . . . , Proceedings of the National Academy of Science of USA, Vo. 89, No. 17, Sep. 1, 1992, pp. 7905-7909.
Wang et al., “High Frequency Recombination Between LOXP Sites in Human Chromosomes Mediated . . . ”, Somatic Cell and Molecular Genetics, vol. 21, No. 6, Nov. 6, 1995, pp. 429-441.
Semenza, et al., “A Nuclear Factor Induced by Hypoxia via De Novo Protein Synthesis binds to the Human Erythropoietin Gene Enhancer at a Site Required for transcriptional Activation”, Molecular and Cellular Biology, Dec. 1992, vol. 12, No. 12, pp. 5447-5454.
Wang, et al., “General involvement of hypoxia-inducible factor 1 in transcriptional response to hypoxia”, Proc. Natl. Acad. Sci., USA, vol. 90, pp. 4304-4308, May 1993.
Dachs, et al., “Targeting gene expression to hypoxic tumor cells”, Nature Medicine, vol. 3, No. 5, May 1997, pp. 515-520.
Damert, et al., “Activator-protein binding potentiates the hypoxia-inducible factor-1-mediated hypoxia-induced transcriptional activation of vascular-endothelial growth factor expression in C6 glioma cells”, Biochem. J., (1997) 327, pp. 419-423.
Tian et al., “Endothelial PAS domain protein 1 (EPAS1), a transcription factor selectively expressed in endothelial cells”, Genes and Development, vol. 11, No. 1, Jan. 1997, pp. 72-82.
Database WPI, JP 62 265992 A, Derwent Publication Ltd., Nov. 1997.
Semenza, et al., “Transcriptional Regulation of Genes Encoding Glycolytic Enzymes by Hypoxia-inducible Factor 1”, The Journal of Biological Chemistry, vol. 269, No. 38, Sep. 1994, pp. 23757-23763.
“General involvement of hypoxia-inducible factor 1 in transcriptional response to hypoxia” Wang et al. Proc. Natl. Acad. Sci. vol. 90, pp. 4304-4308, May 1993.
“Targeting gene expression to hypoxic tumor cells”, Dachs et al., Nature Medicine, vol. 3, No. 5, May 1997.
Li et al., Proc. Natl. Acad. Sci., vol. 93, Jun. 1996, pp. 6158-6122 “Generation of mice with 1-7 a 200-kb amyloid precursor protein gene deletion by Cre recombinase-mediated site specific . . . ”.
Baubonis et al., Nucleic Acids Research, vol. 21, No. 9, May 11, 1993, pp. 2025-2029, “Genomic Targeting with purified CRE recombinase”.
Metzger et al., Proceedings of the National Academy of Sciences of USA, vol. 92, No. 15, Jul. 18, pp. 6991-6995, “Conditional site-specific recombination in mammalian cells . . . ”.
Merrihew et al., Somatic Cell and Molecular Genetics, vol. 21, No. 5, Sep. 1995, pp. 299-307, “Efficient modification of the APRT gene by FLP/FRT site-specific targeting”.
Fukushige et al., Proc. of the National Academy of Sciences of USA, vol. 89, No. 17, Sep. 1, 1992, pp. 7905-7909, “Genomic Targeting with a positive selection lox integration . . . ”.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Optimization of cells for endogenous gene activation does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Optimization of cells for endogenous gene activation, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Optimization of cells for endogenous gene activation will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3568628

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.