Methods for altering organ mass, controlling fertility and...

Multicellular living organisms and unmodified parts thereof and – Method of introducing a polynucleotide molecule into or... – The polynucleotide alters plant part growth

Reexamination Certificate

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C800S303000, C536S023600, C435S320100, C435S468000

Reexamination Certificate

active

06639128

ABSTRACT:

FIELD OF THE INVENTION
The present invention is directed to plant genetic engineering. In particular, it relates to methods of altering organ mass, controlling fertility and enhancing asexual reproduction in plants through the modulation of plant growth and cell proliferation.
BACKGROUND OF THE INVENTION
Control of organ mass/size and fertility in plants is a significant goal in commercial agriculture. Plant shoot vegetative organs and/or structures (e.g. leaves, stems and tubers), roots, flowers and floral organs (e.g. bracts, sepals, petals, stamens, carpels, anthers), ovules (including egg and central cells), seed (including zygote, embryo, endosperm, and seed coat), fruit (the mature ovary) and seedlings are the harvested product of numerous agronomically-important crop plants. Therefore the ability to manipulate the size/mass of these organs/structures through genetic control would be an important agricultural tool. Similarly, induction of sterility in plants is useful in limiting plant pollination and reproduction until it is economically desirable. For example, male sterile plants are often desirable in crops where hybrid vigor increases yield.
The intrinsic plant organ size is determined genetically, although it can be altered greatly by environment signals (e.g. growth conditions). In general, larger organs consist of larger numbers of cells. Since neither cell migration nor cell death plays a major role during plant development, the number of cells in plant organs depends on cell proliferation. Precise regulation of cell proliferation is also necessary for proper development of reproductive organs that make plants fertile. While some basic research has identified genes involved in plant organ development and fertility, little is known about genetic control of cell proliferation or its link to organogenesis including organ size/mass control and fertility in plants. Therefore an important goal is to understand the connection between genes that control organogenesis and genes that control cell proliferation. A great deal of basic research has shown that the components (e.g., cyclin dependent kinases, cyclins and their inhibitors) and mechanisms (e.g., regulation by phosphorylations, ubiquitin-mediated proteolysis) that control the cell cycle in yeast and animals are conserved in higher plants (Burssens, et al.
Plant Physiol Biochem
. 36:9-19 (1998)).
In Arabidopsis, the developing flower includes the ovule. Wild-type ovule development in Arabidopsis has been extensively analyzed (Robinson-Beers et al.,
Plant Cell
4:1237-1249 (1992); Modrusan, et al.
Plant Cell
. 6:333-349 (1994) and Schneitz et al., Plant J. 7:731-749 (1995)). A variety of mutations that affect ovule development have been identified (Klucher et al.,
Plant Cell
8:137-153 (1996); Elliott et al.,
Plant Cell
. 8:155-168 (1996); Baker, et al.,
Genetics
. 145:1109-1124 (1997); Robinson-Beers, et al.,
Plant Cell
. 4:1237-1249 (1992); Modrusan et al.
Plant Cell
. 6:333-349 (1994); Ray, A., et al.
Proc Natl Acad Sci USA
. 91:5761-5765 (1994); Lang, et al.,
Genetics
137:1101-1110 (1994); Leon-Kloosterziel
Plant Cell
. 6:385-392 (1994); Gaiser et al.,
Plant Cell
7:333-345 (1995)), and some of them have been found that specifically affect patterns of cell division (Schneitz, et al.
Development
. 124:1367-1376 (1997)). Of those, several genes have been cloned; AINTEGUMENTA (ANT) (Klucher et al.
Plant Cell
. 8:137-153 (1996); Elliott et al.,
Plant Cell
. 8:155-168 (1996)), AGAMOUS, (Yanofsky et al.,
Nature
. 346:35-39 (1990); Bowman et al.,
Plant Cell
. 3:749-758 (1991)), SUPERMAN (Sakai et al.,
Nature
. 378:199-203 (1995)). Because these genes are expressed and function not only in developing ovules but also in various developing organs, analysis of these mutations and genes has provided general information about the control of cell proliferation during plant development.
Another trait important to the manipulation of crop species is the ability to reproduce or propagate plants through asexual means, particularly vegetative propagation of sterile or hybrid plants, and regeneration of plants from transformed cells. Asexual reproduction includes regeneration of plants from cells or tissue, propagation of plants through cutting by inducing adventitious shoots and roots, and apomixis by forming somatic embryos. Asexual reproduction has the advantage that genetic clones of plants with desirable traits can be readily produced. Not all plants, however, can produce adventitious shoots or roots, or regenerate whole plants from cells or tissue.
In spite of the recent progress in defining the genetic control of plant cell proliferation, little progress has been reported in the identification and analysis of genes effecting agronomically important traits such as organ mass/size, fertility, asexual reproduction, and the like through regulating cell proliferation. Characterization of such genes would allow for the genetic engineering of plants with a variety of desirable traits.
The present invention addresses these and other needs.
SUMMARY OF THE INVENTION
The present invention provides methods for modulating cell proliferation and thus cell number in plants by modulating ANT activity in plants. Typically, the methods comprise modulating the expression of ANT in plants and selecting for plants with altered size/mass, fertility, or both. In some preferred embodiments, the ANT activity is increased and plants with increased cell proliferation and thus increased cell number are selected. One method for modulating ANT expression is by introducing into a plant an expression cassette containing a heterologous ANT nucleic acid operably linked to a promoter. Examples of possible ANT nucleic acids that can be used include nucleic acids at least 50% identical to SEQ ID NO:1 and SEQ ID NO:4. Other examples include nucleic acids that encode the polypeptides at least 60% identical to either SEQ ID NO:2 or SEQ ID NO:5.
The present invention also provides methods for modulating cell proliferation and thus the production of adventitious organs in plants. Typically, the methods comprise increasing the activity or expression of ANT in plants and selecting for plants with adventitious shoots, organs or structures such as embryos. One method for modulating ANT expression is by introducing into a plant an expression cassette containing a heterologous ANT nucleic acid operably linked to a promoter. Examples of possible ANT nucleic acids that can be used include nucleic acids at least 50% identical to SEQ ID NO:1 and SEQ ID NO:4. Other examples include nucleic acids that encode the polypeptides at least 60% identical to either SEQ ID NO:2 or SEQ ID NO:5.
The present invention also provides methods of reproducing a plant through asexual means. Typically, the methods comprise increasing the activity or expression of ANT in plants and selecting a plant reproduced from the plant cell or tissue. One method for modulating ANT expression is by introducing into a plant an expression cassette containing a heterologous ANT nucleic acid operably linked to a promoter. Examples of possible ANT nucleic acids that can be used include nucleic acids at least 50% identical to SEQ ID NO:1 and SEQ ID NO:4. Other examples include nucleic acids that encode the polypeptides at least 60% identical to either SEQ ID NO:2 or SEQ ID NO:5. In various embodiments, the plant arises from an adventitious shoot, a somatic embryo, or a cutting.
In another embodiment of the invention, a heterologous gene is expressed in meristematic tissue of a plant by introducing into a plant an expression cassette containing an ANT promoter operably linked to a heterologous polynucleotide. In a preferred embodiment of this invention, the ANT promoter is shown in SEQ ID NO:3.
The invention also provides isolated nucleic acid molecules comprising an ANT nucleic acid that specifically hybridizes to SEQ ID NO:4, which is isolated from
Brassica napus.
A variety of plant promoters can be used in the methods of the invention. The promoter can be constitutive, inducible or specific f

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