Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving hydrolase
Reexamination Certificate
1999-04-26
2002-04-30
Prouty, Rebecca E. (Department: 1652)
Chemistry: molecular biology and microbiology
Measuring or testing process involving enzymes or...
Involving hydrolase
C435S320100, C435S252300, C435S212000, C424S094630, C536S023200
Reexamination Certificate
active
06379913
ABSTRACT:
FIELD OF THE INVENTION
This invention relates to nucleic acid and amino acid sequences of a novel human serine carboxypeptidase and to the use of these sequences in the diagnosis, prevention, and treatment of disorders associated with expression of serine carboxypeptidase.
BACKGROUND OF THE INVENTION
Serine carboxypeptidases are a family of proteases found in vertebrate and invertebrate tissues that function in many physiological processes. These proteases remove a wide range of COOH-terminal amino acids, and in doing so are able to activate, inactivate, and modulate enzyme and peptide hormone activity. Many active forms of mammalian carboxypeptidases are located in lysosomes where they regulate intracellular protein processing, degradation and turnover. In plants and insects the serine carboxypeptidases play a role in posttranslational protein modifications including mobilization of storage proteins and hormone activation. The extensively characterized KEX1 yeast carboxypeptidase activates K1 and K2 killer toxins and alpha-factor (mating pheromone) by removing the lysine and arginine residues from the precursor forms. The carboxypeptidases exhibiting this enzymatic activity are distinguished by a common catalytic triad, Ser, His, and Asp residues, and are inhibited by serpins (Galjart, J. (1988) Cell 54: 755-764; Latchinian-Sadek, L. et al. (1994) Eur. J. Biochem. 219: 647-652; Elsliger, M. A. (1994) Proteins 18: 81-93).
Human lysosomal protective protein (HPP) is a serine carboxypeptidase with multiple biological properties. It functions as a protease with properties similar to cathepsin A at the acidic pH of lysosomes, and as an esterase or a carboxyl-terminal deamidase at neutral pH. HPP is similar to serine carboxypeptidases derived from insects, yeast and plants that are implicated in proteolytic activation of a number of enzymes or other biologically active molecules. It is synthesized as a 54-kDa precursor and can be processed into a catalytically active disulfide-linked 32 and 20-kDa heterodimer. The precursor dimerizes at neutral pH shortly after synthesis and is transported to the lysosome. The human enzyme, purified from platelets and lymphocytes, functions both in vitro and in vivo to inactivate selected signaling peptides, including substance P, oxytocin, netiropeptides, and endothelin I (Galjart, J., supra; Jackman, H. L. (1990) J. Biol. Chem. 265:11265-11272).
HPP is designated as ‘protective protein’ when it forms a complex with lysosomal glycosidases, &bgr;-D- galactosidase and N-acetyl-neuramidase (sialidase), and protects them from degradation. Complex formation serves to regulate enzyme activity within the lysosomes. An inherited metabolic disease, galactosialidosis, is caused by a genetic defect of in HPP, which results in a deficiency of lysosomal glycosidase activities. When the hydrolytic activity of these lysosomal glycosidases is compromised, heterogeneous neurosomatic manifestations result. Several HPP mutations have been identified for each clinical subtype, and a correlation has been shown between genotype and phenotype (Shimmoto, M., et al.(1993) J. Clin. Invest. 91: 2393-2398).
The vitellins, multisubunit phosphoglycoproteins, are stored in yolk granules and serve as a primary nutrient source for developing embryos. The vitellogenic carboxypeptidase, (VCP), hydrolyzes yolk proteins for utilization by the embryo during development. In mosquito (
Aedes aegypti
), VCP proenzyme is produced in extraovarian tissues, secreted into the hemolymph, and selectively internalized by developing oocytes where it is accumulated in yolk bodies. It is activated at the onset of embryogenesis and is completely degraded by the time the first instar larvae hatch (Cho, W. L., et al. (1991) Proc. Natl. Acad.Sci. 88: 10821-10824).
The discovery of proteins related to human lysosomal protective protein and
Aedes aegypti
vitellogenic carboxypeptidase and the polynucleotides encoding them satisfies a need in the art by providing new compositions useful in the diagnosis and treatment of disorders associated with expression of serine carboxypeptidases.
SUMMARY OF THE INVENTION
The present invention features a novel human serine carboxypeptidase hereinafter designated CPEPT and characterized as having similarity to human lysosomal protective protein (HPP) and
Aedes aegypti
vitellogenic carboxypeptidase(VCP). Accordingly, the invention features a substantially purified CPEPT having the amino acid sequence shown in SEQ ID NO:1. The invention also features a polypeptide variant of CPEPT, SEQ ID NO:3, where D
76
is replaced by G, E
111
is replaced by G, K
418
is removed, G
428
is replaced by E, and T
450
is replaced by I. In addition, the invention features a potential splice variant of CPEPT, SEQ ID NO:5, where D
21
is replaced by G, residues Q
55
through F
86
are replaced by YTGTNSV, K
418
is removed, G
428
is replaced by E, and T
450
is replaced by I.
The invention also features isolated and substantially purified polynucleotides that encode CPEPT, and the CPEPT variants (SEQ ID NO:2, SEQ ID NO:4, and SEQ ID NO:6)
The invention also features a substantially purified CPEPT potential splice variant having the amino acid sequence shown in SEQ ID NO:5.
The invention also features polynucleotide sequences comprising the complement of SEQ ID NO:2, SEQ ID NO:4, and SEQ ID NO 6 or variants thereof In addition, the invention features polynucleotide sequences which hybridize under stringent conditions to SEQ ID NO:2, SEQ ID NO:4, and SEQ ID NO:6.
The invention additionally features expression vectors and host cells comprising polynucleotides that encode CPEPT and in particular those polynucleotides having SEQ ID NO:2, SEQ ID NO:4, or SEQ ID NO:6. The invention also features antibodies which bind specifically to CPEPT, and pharmaceutical compositions comprising substantially purified CPEPT. The invention also features agonists and antagonists of CPEPT. The invention also features a method for treating disorders associated with decreased serine carboxypeptidase levels by administering CPEPT and a method for treating disorders associated with increased serine carboxypeptidase levels by administering an antagonist to CPEPT.
REFERENCES:
GenBank Accession No. AA129401, Nov. 1996.*
GenBank Accession No. R88882, Nov. 1996.*
Galjart, N.J., et al., “Expression of cDNA Encoding the Human “Protective Protein” Associated with Lysosomal &bgr;-Galactosidase and Neuraminidase: Homolgy to Yeast Proteases”,Cell, 54: 755-764 (1988).
Latchinian-Sadek, L., et al., “Secretion, purification and characterization of a soluble form of the yeast KEX1-encoded protein from insect-cell cultures”,Eur J. Biochem, 219: 647-652 (1994).
Elsliger, M., et al., “Homologous Modeling of the Lysosomal Protective Protein/Carboxypeptidase L: Structural and Functional Implications of Mutations Identified in Galactosialidosis Patients”,Proteins: Structure, Function, and Genetics, 18: 81-93 (1994).
Jackman, H.L., et al., A Peptidase in Human Platelets That Deamidates Tachykinins Probable Identity with Lysosomal “Protective Protein”,The Journal of Biological Chemistry, 265(19): 11265-11272 (1990).
Shimmoto, M., et al., “Protective Protein Gene Mutations in Galactosialidosis”,J Clin. Invest., 91: 2393-2398 (1993).
Cho, W.L., et al., “An extraovarian protein accumulated in mosquito oocytes is a carboxypeptidase activated in embryos”,Proc Natl Acad Sci USA, 88(23): 10821-10824 (1991).
Cho, W.L., et al., (GI 1718107) GenBank Sequence Database (Accession P42660), National Center for Biotechnology Information: National Library of Medicine, Bethesda, Maryland 20849.
Cho, W.L., et al., (GI 159555) GenBank Sequence Database (Accession M79452), National Center for Biotechnology Information: National Library of Medicine, Bethesda, Maryland 20849.
Cho, W.L., et al., (Gi 473361) GenBank Sequence Database (Accession M79452), National Center for Biotechnology Information: National Library of Medicine, Bethesda, Maryland 20849.
Deitsch, K.W., et al., (GI 945383) GenBank Sequence Database (Accession L46594), National Center for Bi
Bandman Olga
Goli Surya K.
Hawkins Phillip R.
Hillman Jennifer L.
Lal Preeti
Incyte Genomics Inc.
Incyte Genomics, Inc.
Prouty Rebecca E.
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