Cystine knot molecules

Drug – bio-affecting and body treating compositions – Designated organic active ingredient containing – Peptide containing doai

Reexamination Certificate

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C514S012200, C530S300000, C530S317000, C530S370000, C530S334000, C530S335000, C530S344000

Reexamination Certificate

active

07960340

ABSTRACT:
The present invention relates generally to a molecular framework having a cyclic structure. More particularly, the present invention provides cyclic proteins and derivatives thereof in which particular turns and other elements of the molecular structure are held in defined orientations with respect to each other. The cyclic proteins of the present invention provide a molecular framework for the introduction of particular amino acids or heterologous amino acid sequences to facilitate the presentation of biological activities associated with these heterologous amino acid sequences. The molecular framework of the present invention may be naturally cyclic or may be a cyclized derivative of a linear molecular or may be a linear derivative of a cyclized molecule. The present invention contemplates the use of the molecular framework with or without particular amino acids inserted or substituted thereon for the treatment of or prophylaxis of disease conditions in animals, mammals (including humans) and plants.

REFERENCES:
patent: 7687457 (2010-03-01), Craik et al.
patent: WO 99/00406 (1999-01-01), None
patent: WO 99/54358 (1999-10-01), None
patent: WO/00/68265 (2000-11-01), None
Database PBD, Jan. 13, 1995. XP002351103, PDB Accession No. 1KAL.
Derua, Rita et al., Sep. 30, 1996. XP002351615, “Analysis of the dislulfide linkage pattern in circulin A and B, HIV-inhibitory macrocyclic peptides”Biochemical and Biophysical Research Communication vol. 228, pp. 623-638.
Daly, N. L., A. Koltay and D. J. Craik, Jun. 12, 1998. XP002351099, “Circulin A from Chassalia Parviflora, NMR, 12 Structures.” Database PDB Accession No. 1BH4.
Craik, D. J. et al., Dec. 17, 1999, “Plant Cyclotides: A Unique Family of Cyclic and Knotted Proteins that Defines the Cyclic Cystune Knot Structural Motif.” Journal of Molecular Biology. 1327-1336.
Database UniProt ′Online!, May 30, 2000, “Circulin A (CIRA.)” XP002351100, EBI Accession No. Uniprot: Cira-Chapa.
Database EPO Proteins ′Online!, Dec. 15, 2000, “Sequence 10 from Patent WO0068265.” XP002351102, EBI Accession No. EPOP: AX047096.
Database UniProt, Feb. 28, 2003, “Cycloviolacin 05”, XP002351101, UniProt Accession No. CY05-VI00D.
Chemical Abstracts 112:116819 (J. Siekmann et al., Biol. Chem. Hoppe-Seyler, 370(7), pp. 677-681 (1989)).
Chemical Abstracts 121:200908 (K.R. Gustafson et al., J. Am. Chem. Soc., 116(20) pp. 9337-9338 (1994)).
Chemical Abstracts 122:156318 (K.M. Witherup et al., J. Nat. Prod., 57(12), pp. 1619-1625 (1994)).
Chemical Abstracts 126:26370 (R. Derua et al., Biochem. Biophys. Res. Commun., 228(2), pp. 632-638 (1996).
J.P. Tam et al., Protein Sci., 7(7), pp. 1583-1592 (1998).
Chemical Abstracts 130:264790 (V. Goeransson et al., J. Nat. Prod., 62(2), pp. 283-286 (1999)).
J.P. Tam et al., J. Am. Chem. Soc., 121(18), pp. 4316-4324 (1999).
Chemical Abstracts 131:243565 (N.L. Daly et al., Biochemistry, 38(32), pp. 10606-10614 (1999).
J.P. Tam et al., Proc. Natl. Acad. Sci. USA, 96, pp. 8913-8918 (Aug. 1999).
Chemical Abstracts 122:25598 (P.K. Pallaghy et al., Protein Sci., 3(10), pp. 1833-1836 (1994)).
Hernandez JF et al., 2000, “Squash Trypsin Inhibitors fromMomordica cochinchinensisExhibit an Atypical Macrocyclic Structure”Biochemistry, 39:5722-5730.
Daly NL et al., 1999, “Solution Structure by NMR of Circulin A: A Macrocyclic Knotted Peptide Having Anti-HIV Activity”J. Mol. Biol., 285:333-345.
Daly NL et al., 1999, “Chemical Synthesis and Folding Pathways of Large Cyclic Polypeptides: Studies of the Cystine Knot Polypeptide Kalata B1”Biochemistry, 38:10606-10614.
Oosterom J et al., 1999, “Conformation of the Core Sequence in Melanocortin Peptides Directs Selectivity for the Melanocortin MC3 and MC4 Receptors”J. Biol. Chem., 274(24):16853-16860.
Göranswson U et al., 1999, Seven Novel Macrocyclic Polypeptides fromViola arvensis, J. Nat. Prod., 62:283-286.
Murthy Krishna HM et al., 1999, “Dengue Virus NS3 Serine Protease”J. Biol. Chem., 274(9):5573-5580.
Claeson P. et al., 1998, “Fractionation Protocol for the Isolation of Polypeptides from Plant Biomass”J. Nat. Prod., 61:77-81.
Norton RS et al., 1998, “The Cystine Knot Structure of Ion Channel Toxins and Related Polypeptides”Toxicon, 36(11):1573-1583.
Vervoot J et al., 1997, “The race-specific elicitor AVR9 of the tomato pathogenCladosporium fulvum: a cystine knot protein”Febs Letters, 404:153-158.
Nielsen KJ et al., 1996, “A Consensus Structure for ω-Conotoxins with Different Selectivities for Voltage-sensitive Calcium Channel Subtypes: Comparison of MVIIA, SVIB and SNX-202”J. Mol. Biol., 263:297-310.
Broekaert WF et al., 1995, “Plant Defensins: Novel Antimicrobial Peptides as Components of the Host Defense System”Plant Physiol,, 108:1353-1358.
Chen W et al., 1995, “A Colorimetric Assay for Measuring Activation of Gs- and Gq-Coupled Signaling Pathways”Analytical Biochemistry, 226:349-354.
Issacs NW, 1995, “Cystine Knots”Current Opinion in Structural Biology, 5:391-395.
Saether O et al., 1995, “Elucidation of the Primary and Three-Dimensional Structure of the Uterotonic Polypeptide Kalata B1”Biochemistry, 34:4147-4158.
Gustafson KR et al., 1994, “Circulins A and B: Novel HIV-Inhibitory Macrocyclic Peptides from the Tropical TreeChassalia parvifolia” J Am. Chem. Soc., 116:9337-9338.
Narqsimham et al., 1994, “Snail and spider toxins share a similar tertiary structure and 'cystine motif”Structural Biology, 1(12):850-852.
Pallaghy PK et al., 1994, “A common structural motiff incorporating a cystine knot and a triple-stranded β-sheet in toxic and inhibitory polypeptides”Protein Science, 3:1833-1839.
Witherup KM et al., 1994, “Cyclopsychotride A, A Biologically Active, 31-Residue Cyclic Peptide Isolated From Psychotria Longipes”Journal of Natural Products, 57(12):1619-1625.
Benham CJ et al., 1993, “Disulfide bonding patterns and protein topologies”Protein Science, 2:41-54.
McDonald NQ et al., 1993, “A Structural Superfamily of Growth Factors Containing a Cystine Knot Motif”Cell, 73:421-424.
Murray-Rust JM et al., 1993, “Topological similarities in TGF-β2, PDGF-BB and NGF define a superfamily of polypeptide growth factors”Current Biology, 1:153-159.
Schöpke MI et al., 1993, Hämolytisch aktive Komponenten ausViola tricolorL. undViola arvensisMurraySci. Pharm., 61:145-153.
Schnölzer M et al., 1992, “In situ neutralization in Boc-chemistry solid phase peptide synthesis”Int. J. Protein Res., 40:180-193.
Favel A et al., 1989, “Protease inhibitors fromEcballium elateriumseeds”Int J. Peptide Protein Res. 33:202-208.
Olivera BM et al., 1987, “Neuronal Calcium Channel Antagonists.. Discrimination between Calcium Channel Subtypes Using ω-Conotoxin fromConus magusVenom”Biochemistry, 26:2086-2090.
Wüthrich K, 1984, “Polypeptide Secondary Structures in Proteins by NMR,” Chapter 9,NMR of Proteins and Nucleic Acids, Wiley and Sons, New York.
Cruz LJ et al., 1986, “Calcium Channel Antagonists”J. Biol. Chem. 261(14):6230-6233.
Kohler et al., 1975, “Continuous Cultures of fused cells secreting antibody of predefined specificity,”Nature, 256:495-499.

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